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SRX5683461: Zosterops borbonicus long-range sequencing
1 PACBIO_SMRT (PacBio RS) run: 163,210 spots, 794.7M bases, 529.7Mb downloads

Design: PacBio sequencing SMRT cell, 20kb size fractionation.
Submitted by: University of Montpellier
Study: Zosterops borbonicus and Zosterops pallidus genome sequencing
show Abstracthide Abstract
White-eye (Zosterops) species are typical examples of taxa spanning the whole “grey zone” of speciation. As a consequence of these different degrees of reproductive isolation between taxa, white-eyes have long been used as models to study bird speciation. Among all white-eyes species, one species - the Réunion grey white-eye Zosterops borbonicus - received considerable attention over the last 50 years. This species is endemic from the Reunion volcanic island and has an interesting pattern of microgeographical variation on this island of only about 2,500 km2, with five distinct colour variants distributed over four specific regions. Both plumage color differentiation data and genetic data support this extensive within-island diversification. The present project compasses whole-genome sequencing and transcriptome data from Zosterops borbonicus and a closely related south-american species (Zosterops pallidus).
Sample: Grey morph highland Zosterops borbonicus 15179
SAMN11339519 • SRS4591342 • All experiments • All runs
Library:
Name: ZoBo_15179_pacbio_13
Instrument: PacBio RS
Strategy: WGS
Source: GENOMIC
Selection: size fractionation
Layout: SINGLE
Runs: 1 run, 163,210 spots, 794.7M bases, 529.7Mb
Run# of Spots# of BasesSizePublished
SRR8897335163,210794.7M529.7Mb2019-04-15

ID:
7658398

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